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Centre for Pathogen Evolution

 

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  • Trevor Bedford, Steven Riley, Ian G. Barr, Shobha Broor, Mandeep Chadha, Nancy J. Cox, Rodney S. Daniels, C. Palani Gunasekaran, Aeron C. Hurt, Anne Kelso, Alexander Klimov, Nicola S. Lewis, Xiyan Li, John W. McCauley, Takato Odagiri, Varsha Potdar, Andrew Rambaut, Yuelong Shu, Eugene Skepner, Derek J. Smith, Marc A. Suchard, Masato Tashiro, Dayan Wang, Xiyan Xu, Philippe Lemey & Colin A. Russell (2015). Global circulation patterns of seasonal influenza viruses vary with antigenic drift. Nature, 523(7559):217-220. doi:10.1038/nature14460
  • Leah C. Katzelnick, Judith M. Fonville, Gregory D. Gromowski, Jose Bustos Arriaga, Angela Green, Sarah L. James, Louis Lau, Magelda Montoya, Chunling Wang, Laura A. VanBlargan, Colin A. Russell, Hlaing Myat Thu, Theodore C. Pierson, Philippe Buchy, John G. Aaskov, Jorge L. Muñoz-Jordán, Nikos Vasilakis, Robert V. Gibbons, Robert B. Tesh, Albert D.M.E. Osterhaus, Ron A.M. Fouchier, Anna Durbin, Cameron P. Simmons, Edward C. Holmes, Eva Harris, Stephen S. Whitehead, Derek J. Smith (2015). Dengue viruses cluster antigenically but not as discrete serotypes. Science, 349(6254):1338-1343. doi:10.1126/science.aac5017
  • Sheng-Wen Huanga, Ching-Hui Taie, Judith M. Fonville, Chin-Hui Linb, Shih-Min Wanga, Ching-Chung Liua, Ih-Jen Sue, Derek J. Smith and Jen-Ren Wang (2015). Mapping Enterovirus A71 Antigenic Determinants from Viral Evolution. Sandri-Goldin R.M., ed. Journal of Virology, 89(22):11500-11506. doi:10.1128/JVI.02035-15
  • W. E. P. Beyer, J.McElhaney, D. J. Smith, A. S. Monto, J. S. Nguyen-Van-Tam, A. D. M. E. Osterhaus (2015) Reply: Letter to the Editor, Cochrane Rearranged. Vaccine, 33(1):13-14. doi:10.1016/j.vaccine.2014.05.045
  • Björn F. Koel, Ramona Mögling, Salin Chutinimitkula, Pieter L. Fraaij, David F. Burke, Stefan van der Vliet, Emmie de Wit, Theo M. Bestebroer, Guus F. Rimmelzwaan, Albert D. M. E. Osterhaus, Derek J. Smith, Ron A. M. Fouchier and Miranda de Graaf (2015). Identification of Amino Acid Substitutions Supporting Antigenic Change of Influenza A(H1N1)pdm09 Viruses. García-Sastre A., ed. Journal of Virology, 89(7):3763-3775. doi:10.1128/JVI.02962-14
  • David E. Swayne, David L. Suarez, Erica Spackman, Samadhan Jadhao, Gwenaelle Dauphin, Mia Kim-Torchetti, James McGrane, John Weaver, Peter Daniels, Frank Wong, Paul Selleck, Agus Wiyono, Risa Indriani, Yuni Yupiana, Elly Sawitri Siregar, Teguh Prajitno, Derek Smith and Ron Fouchier (2015). Antibody Titer Has Positive Predictive Value for Vaccine Protection against Challenge with Natural Antigenic-Drift Variants of H5N1 High-Pathogenicity Avian Influenza Viruses from Indonesia. García-Sastre A., ed. Journal of Virology, 89(7):3746-3762. doi:10.1128/JVI.00025-15
  • Benjamin M. Althouse, Samuel V. Scarpino, Lauren Ancel Meyers, John W. Ayers, Marisa Bargsten, Joan Baumbach, John S. Brownstein, Lauren Castro, Hannah Clapham, Derek A. T. Cummings, Sara Del Valle, Stephen Eubank, Geoffrey Fairchild, Lyn Finelli, Nicholas Generous, Dylan George, David R Harper, Laurent Hébert-Dufresne, Michael A. Johansson, Kevin Konty, Marc Lipsitch, Gabriel Milinovich, Joseph D. Miller, Elaine O. Nsoesie, Donald R. Olson, Michael Paul, Philip M Polgreen, Reid Priedhorsky, Jonathan M. Read, Isabel Rodríguez-Barraquer, Derek J. Smith, Christian Stefansen, David L. Swerdlow, Deborah Thompson, Alessandro Vespignani and Amy Wesolowski (2015). Enhancing disease surveillance with novel data streams: challenges and opportunities. EPJ Data Science, 4(1):17. doi:10.1140/epjds/s13688-015-0054-0
  •  Gavin J. D. Smith, Ruben O. Donis, World Health Organization/World Organisation for Animal Health/Food and Agriculture Organization (WHO/OIE/FAO) H5 Evolution Working Group (2015). Nomenclature updates resulting from the evolution of avian influenza A(H5) virus clades 2.1.3.2a, 2.2.1, and 2.3.4 during 2013-2014. Influenza and Other Respiratory Viruses, 9(5):271-276. doi:10.1111/irv.12324