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Centre for Pathogen Evolution

 

For queries relating to publications, please contact: CPEadmin@zoo.cam.ac.uk

  • Rössler, A., Knabl, L., Netzl, A., Bante, D., Borena, W., von Laer, D., Smith, D. J., Kimpel, J. (2023). Durability of cross-neutralizing antibodies 5.5 months after bivalent COVID-19 booster. The Journal of Infectious Diseases. doi:10.1093/infdis/jiad472

  • Wilks, S. H., Mühlemann, B., Shen, X., Türeli, S., LeGresley, E. B., Netzl, A.,Caniza, Miguela A., Chacaltana-Huarcaya, Jesus N., Corman, Victor M., Daniell, Xiaoju, Datto, Michael B., Dawood, Fatimah S., Denny, Thomas N., Drosten, Christian, Fouchier, Ron A. M., Garcia, Patricia J., Halfmann, Peter J., Jassem, Agatha, Jeworowski, Lara M., Jones, Terry C., Kawaoka, Yoshihiro, Krammer, Florian, McDanal, Charlene, Pajon, Rolando, Simon, Viviana, Stockwell, Melissa S., Tang, Haili, van Bakel, Harm, Veguilla, Vic, Webby, Richard, Montefiori, David C. Smith, D. J. (2023). Mapping SARS-CoV-2 antigenic relationships and serological responses. Science, 382(6666). doi:10.1126/science.adj0070

  • Branche, Angela R; Rouphael, Nadine G; Losada, Cecilia; Baden, Lindsey R; Anderson, Evan J; Luetkemeyer, Anne F; Diemert, David J; Winokur, Patricia L; Presti, Rachel M; Kottkamp, Angelica C; Falsey, Ann R; Frey, Sharon E; Rupp, Richard; Bäcker, Martín; Novak, Richard M; Walter, Emmanuel B; Jackson, Lisa A; Little, Susan J; Immergluck, Lilly C; Mahgoub, Siham M; Whitaker, Jennifer A; Babu, Tara M; Goepfert, Paul A; Fusco, Dahlene N; Atmar, Robert L; Posavad, Christine M; Netzl, Antonia; Smith, Derek J; Telu, Kalyani; Mu, Jinjian; Makowski, Mat; Makhene, Mamodikoe K; Crandon, Sonja; Montefiori, David C; Roberts, Paul C; Beigel, John H. (2023). Immunogenicity of the BA.1 and BA.4/BA.5 Severe Acute Respiratory Syndrome Coronavirus 2 Bivalent Boosts: Preliminary Results From the COVAIL Randomized Clinical Trial. Clinical Infectious Diseases, 77(4), 560–564. doi:10.1093/cid/ciad209

  • Branche, Angela; Rouphael, Nadine; Diemert, David; Falsey, Ann; Losada, Cecilia; Baden, Lindsey R; Frey, Sharon; Whitaker, Jennifer; Little, Susan; Anderson, Evan; Walter, Emmanuel; Novak, Richard; Rupp, Richard; Jackson, Lisa; Babu, Tara; Kottkamp, Angelica; Luetkemeyer, Annie; Immergluck, Lilly; Presti, Rachel; Backer, Martin; Winokur, Patricia; Mahgoub, Siham; Goepfert, Paul; Fusco, Dahlene; Malkin, Elissa; Bethony, Jeff; Walsh, Edward; Graciaa, Daniel; Samaha, Hady; Sherman, Amy; Walsh, Stephen; Abate, Getahun; Oikonomopoulou, Zacharoula; Sahly, Hana El; Martin, Thomas; Kamidani, Satoshi; Smith, Michael; Ladner, Benjamin; Porterfield, Laura; Dunstan, Maya; Wald, Anna; Davis, Tamia; Atmar, Robert; Mulligan, Mark; Lyke, Kirsten; Posavad, Christine; Meagher, Megan; Stephens, David; Neuzil, Kathleen; Abebe, Kuleni; Hill, Heather; Albert, Jim; Telu, Kalyani; Mu, Jinjian; Lewis, Teri; Giebeig, Lisa; Eaton, Amanda; Netzl, Antonia; Wilks, Sam; Tureli, Sina; Makhene, Mamodikoe; Crandon, Sonja; Montefiori, David; Makowski, Mat; Smith, Derek; Nayak, Seema; Roberts, Paul; Beigel, John. (2023). Comparison of bivalent and monovalent SARS-CoV-2 variant vaccines: the phase 2 randomized open-label COVAIL trial. Nature Medicine. doi:10.1038/s41591-023-02503-4

  • Mühlemann, B., Trimpert, J., Walper, F., Schmidt, M. L., Schroeder, S., Jeworowski, L. M., Beheim-Schwarzbach, J., Bleicker, T., Niemeyer, D., Adler, J., Vidal, R. M., Langner, C., Vladimirova, D., Smith, D. J., Voß, M., Paltzow, L., Christophersen, C. M., Rose, R., Krumbholz, A., Jones, T. C., Corman, V. M.,  Drosten, C. (2023). Antigenic cartography using variant-specific hamster sera reveals substantial antigenic variation among Omicron subvariants. BioRxiv, 2023.07.02.547076. doi:10.1101/2023.07.02.547076

  • Rössler, Annika; Netzl, Antonia; Knabl, Ludwig; Bante, David; Wilks, Samuel H.; Borena, Wegene; von Laer, Dorothee; Smith, Derek J.; Kimpel, Janine (2023). Characterizing SARS-CoV-2 neutralization profiles after bivalent boosting using antigenic cartography. Nature Communications, 14(1), 5224. doi:10.1038/s41467-023-41049-4

  • Kok, A., Scheuer, R., Bestebroer, T. M., Burke, D. F., Wilks, S. H., Spronken, M. I., Smith, Derek J., Herfst, Sander, Fouchier, Ron A. M, Richard, M. (2023). Characterization of A/H7 influenza virus global antigenic diversity and key determinants in the hemagglutinin globular head mediating A/H7N9 antigenic evolution. MBio. doi:10.1128/mbio.00488-23

  • Rouphael, N. G., Branche, A. R., Diemert, D. J., Falsey, A. R., Losada, C., Baden, L. R., Frey, Sharon E., Whitaker, Jennifer A., Little, Susan J., Kamidani, Satoshi., Walter, Emmanuel B., Novak, Richard M., Rupp, Richard, Jackson, Lisa A., Babu, Tara M., Kottkamp, Angelica C., Luetkemeyer, Anne F., Immergluck, Lilly C., Presti, Rachel M., Bäcker, Martín, Winokur, Patricia L., Mahgoub, Siham M., Goepfert, Paul A., Fusco, Dahlene N., Atmar, Robert L., Posavad, Christine M, Netzl, Antonia, Smith, Derek J., Telu, Kalyani, Mu, Jinjian, McQuarrie, Lisa J., Makowski, Mat, Makhene, Mamodikoe K., Crandon, Sonja, Montefiori, David C., Roberts, Paul C., Beigel, J. H. (2023). Immunogenicity of a Two Dose Regimen of Moderna mRNA Beta/Omicron BA.1 Bivalent Variant Vaccine Boost in a Randomized Clinical TrialThe Journal of Infectious Diseases. doi:10.1093/infdis/jiad323

  • Turner, Sam; Alisoltani, Arghavan; Bratt, Debbie; Cohen-Lavi, Liel; Dearlove, Bethany L.; Drosten, Christian; Fischer, Will M.; Fouchier, Ron A.M.; Gonzalez-Reiche, Ana Silvia; Jaroszewski, Lukasz; Khalil, Zain; LeGresley, Eric; Johnson, Marc; Jones, Terry C.; Mühlemann, Barbara; O’Connor, David; Sedova, Mayya; Shukla, Maulik; Theiler, James; Wallace, Zachary S.; Yoon, Hyejin; Zhang, Yun; van Bakel, Harm; Degrace, Marciela M.; Ghedin, Elodie; Godzik, Adam; Hertz, Tomer; Korber, Bette; Lemieux, Jacob; Niewiadomska, Anna M.; Post, Diane J.; Rolland, Morgane; Scheuermann, Richard; Smith, Derek J. (2023). US National Institutes of Health Prioritization of SARS-CoV-2 Variants. Emerging Infectious Diseases, 29(5). doi:10.3201/eid2905.221646

  • Mykytyn, Anna Z; Rosu, Miruna E; Kok, Adinda; Rissmann, Melanie; van Amerongen, Geert; Geurtsvankessel, Corine; de Vries, Rory D; Munnink, Bas B Oude; Smith, Derek J; Koopmans, Marion P G; Lamers, Mart M; Fouchier, Ron A M; Haagmans, Bart L. (2023). Antigenic mapping of emerging SARS-CoV-2 omicron variants BM.1.1.1, BQ.1.1, and XBB.1. The Lancet Microbe. doi:10.1016/S2666-5247(22)00384-6