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Centre for Pathogen Evolution

 

For queries relating to publications, please contact: CPEadmin@zoo.cam.ac.uk

  • Ying, Baoling; Whitener, Bradley; VanBlargan, Laura A.; Hassan, Ahmed O.; Shrihari, Swathi; Liang, Chieh-Yu; Karl, Courtney E.; Mackin, Samantha; Chen, Rita E.; Kafai, Natasha M.; Wilks, Samuel H.; Smith, Derek J.; Carreño, Juan Manuel; Singh, Gagandeep; Krammer, Florian; Carfi, Andrea; Elbashir, Sayda M.; Edwards, Darin K.; Thackray, Larissa B.; Diamond, Michael S. Beneath the surface: Amino acid variation underlying two decades of dengue virus antigenic dynamics in Bangkok, Thailand. Lowen AC, ed. PLOS Pathog. 2022;18(5):e1010500. doi:10.1371/journal.ppat.1010500

  • Marciela M DeGrace, Elodie Ghedin, Matthew B Frieman, Florian Kramer… Sarah L James, Terry C Jones, Eric B LeGresley, Barbara Mühlemann, Antonia Netzl, Sina Türeli, Samuel A Turner, Samuel H Wilks...(+121)… Derek J Smith, Michael S Diamond, Diane J Post, Mehul S Suthar. Defining the risk of SARS-CoV-2 variants on immune protection. Nature. March 2022. doi:10.1038/s41586-022-04690-5.

  • Anna Z Mykytyn, Melanie Rissmann, Adinda Kok, Miruna E Rosu, Debby Schipper, Tim I Breugem, Petra B van den Doel, Felicity Chandler, Theo Bestebroer, Maurice de Wit, Martin E van Royen, Richard Molenkamp, Bas B Oude Munnink, Rory D de Vries, Corine GeurtsvanKessel, Derek J Smith, Marion P G Koopmans, Barry Rockx, Mart M Lamers, Ron Fouchier, Bart L Haagmans. Omicron BA.1 and BA.2 are antigenically distinct SARS-CoV-2 variants. bioRxiv. January 2022:2022.02.23.481644. doi:10.1101/2022.02.23.481644

  • Maria Auladell, Hoang Vu Mai Phuong, Le Thi Quynh Mai, Yeu-Yang Tseng, Louise Carolan, Sam Wilks, Pham Quang Thai, David Price, Nguyen Thanh Duong, Nguyen Le Khang Hang, Le Thi Thanh, Nguyen Thi Hong Thuong, Tran Thi Kieu Huong, Nguyen Thi Ngoc Diep, Vu Thi Ngoc Bich, Arseniy Khvorov, Luca Hensen, Tran Nhu Duong, Katherine Kedzierska, Dang Duc Anh, Heiman Wertheim, Scott D.Boyd, Kim L.Good-Jacobson, Derek Smith, Ian Barr, Sheena Sullivan, H. Rogier van Doorn, Annette Fox. Influenza virus infection history shapes antibody responses to influenza vaccination. Nat Med. 2022;28(2):363-372. doi:10.1038/s41591-022-01690-w

  • Baoling Ying, Bradley Whitener, Laura A. VanBlargan, Ahmed O. Hassan, Swathi Shrihari, Chieh-Yu Liang, Courtney E. Karl, Samantha Mackin, Rita E. Chen, Natasha M.Kafai, Samuel H. Wilks, Derek J. Smith, Juan Manuel Carreño, Gagandeep Singh, Florian Krammer, Andrea Carfi, Sayda M. Elbashir, Darin K. Edwards, Larissa B. Thackray. Michael S Diamond. Protective activity of mRNA vaccines against ancestral and variant SARS-CoV-2 strains. Sci Transl Med. 2022;14(630). doi:10.1126/scitranslmed.abm3302

  • Antonia Netzl, Sina Türeli, Eric B LeGresley, Barbara Mühlemann, Samuel H Wilks, Derek J Smith. Analysis of SARS-CoV-2 Omicron Neutralization Data up to 2021-12-22. bioRxiv. January 2022:2021.12.31.474032. doi:10.1101/2021.12.31.474032

  • Samuel H Wilks, Barbara Mühlemann, Xiaoying Shen, Sina Türeli, Eric B LeGresley, Antonia Netzl, Miguela A Caniza, Jesus N Chacaltana-Huarcaya, Xiaoju Daniell, Michael B Datto, Thomas N Denny, Christian Drosten, Ron A M Fouchier, Patricia J Garcia, Peter J Halfmann, Agatha Jassem, Terry C Jones, Yoshihiro Kawaoka, Florian Krammer, Charlene McDanal, Rolando Pajon, Viviana Simon, Melissa Stockwell, Haili Tang, Harm van Bakel, Richard Webby, David C Montefiori, Derek J Smith. Mapping SARS-CoV-2 antigenic relationships and serological responses. bioRxiv. January 2022:2022.01.28.477987. doi:10.1101/2022.01.28.477987